Selected Publications
Koukos PI, Roel-Touris J, Ambrosetti F, Geng C, Schaarschmidt J, Trellet ME, Melquiond ASJ, Xue LC, Honorato RV, Moreira IS, Kurkcuoglu Z, Vangone A, Bonvin AMJJ, An overview of data-driven HADDOCK stratergies in CAPRI rounds 38-45, Proteins, 2020, https://doi.org/10.1002/prot.25869
Matos-Filipe P, Preto AJ, Koukos PI, Mourao J, Bonvin AMJJ, Moreira IS, MENSADB: a through structural analysis of membrane protein dimers, 2019, arXiv: 1999; 1902.02321.
Bueschbell B, Barreto CAV, Preto AJ, Schiedel AC, Moreira IS, A complete assessment of dopamine receptor-ligand interactions through computational methods, Molecules. 2019; 24, 1196.
Almeida JG, Preto AJ, Kuokos P, Bonvin AMJJ, Moreira IS, Membrane proteins structure: a review on the major computational tools, Biochim Biophys Acta, 2017, 1859, 2021-2039.
Moreira IS, Koukos P, Melo R, Almeida JG, Preto AJ, Schaarschmidt J, Trellet M, Gumus ZH, Costa J, Bonvin, AMJJ, SpotON: a web server for prediction of protein-protein binding hot-spots. 2017, Sci Rep, 7(1):8007.
Melo R, Fieldhouse R, Melo A, Correia JDG, Cordeiro MNDS, Gümüş ZG, Costa J, Bonvin AMJJ, Moreira IS, A Machine-Learning Approach for Hot-Spot Detection at Protein-Protein Interfaces, 2016, Int J Mol Sci., 2016, 17(8). Pii: E1215.
Sensoy O, Moreira IS, Morra G, Understanding the differential selectivity of arrestins toward the phosphorylation state of the receptor, 2016, ACS Chem. Neurosci., 2016, 7, 1212-24.
Munteanu CR, Pimenta AC, Fernandez-Lozano C, Melo A, Cordeiro MNDS, Moreira IS. SASA-Based Hot-Spot Detection 2 (SBHD) method for protein-protein and protein-nucleic acid interfaces J. Chem. Info. Model., 2015, 55, 1077-86.
Pimenta AC, Dourado DFAR, Martins JM, Melo A, Cordeiro MNDS, Almeida RD, Morra G, Moreira IS, Dynamic structure of NGF and proNGF complexed with p75NTR: pro-peptide effect. J. Chem. Info. Model., 2014, 54, 2051-67.
Martins JM, Ramos RM, Pimenta AC, Moreira IS, Solvent-accessible surface area: how well can be applied to hot-spot detection? Proteins, 2014, 82, 479-90.
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